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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6862657 chr5:45905997 A/C LOC647121 chr1:121260910-121313686:+ -0.38 -8.12 3.9E-15 Box Plot
THCA rs6865195 chr5:170808521 C/T CLEC2D chr12:9817565-9852151:+ -0.2 -6.34 5.37E-10 Box Plot
THCA rs6865429 chr5:45830508 G/A LOC647121 chr1:121260910-121313686:+ -0.36 -7.76 5.16E-14 Box Plot
THCA rs6868823 chr5:49841110 C/G LOC647121 chr1:121260910-121313686:+ -0.37 -7.68 9.14E-14 Box Plot
THCA rs6869459 chr5:59119583 A/C MTA3 chr2:42721709-42984087:+ -0.3 -6.23 1.04E-9 Box Plot
THCA rs6869871 chr5:49686563 A/G LOC647121 chr1:121260910-121313686:+ 0.38 8.1 4.67E-15 Box Plot
THCA rs6870223 chr5:151674306 C/T FILIP1L chr3:99548985-99833357:- -0.22 -6.13 1.83E-9 Box Plot
THCA rs6870359 chr5:176710065 C/G LOC388955 chr2:63849182-63850159:- 0.93 24.44 3.36E-86 Box Plot
THCA rs687037 chr11:77596104 C/A INTS4L1 chr7:64601603-64694600:+ 0.65 10.06 1.01E-21 Box Plot
THCA rs6870407 chr5:151674511 A/T FILIP1L chr3:99548985-99833357:- -0.22 -6.13 1.83E-9 Box Plot
THCA rs6870567 chr5:151674591 A/G FILIP1L chr3:99548985-99833357:- -0.22 -6.13 1.83E-9 Box Plot
THCA rs6871161 chr5:170809884 A/T CLEC2D chr12:9817565-9852151:+ -0.19 -5.92 6.04E-9 Box Plot
THCA rs6872201 chr5:176720766 A/G LOC388955 chr2:63849182-63850159:- 0.36 8.67 6.98E-17 Box Plot
THCA rs6874016 chr5:49845474 A/T LOC647121 chr1:121260910-121313686:+ -0.37 -7.7 7.87E-14 Box Plot
THCA rs6874206 chr5:176650971 G/T LOC388955 chr2:63849182-63850159:- -0.83 -22.06 6.9E-75 Box Plot